Model Zoo

A Model Zoo for parameter files used for image registration with Elastix, SimpleElastix or ITKElastix in various domains. Parameter files can be uploaded via the GitHub repository.

Par0002

interpatient; several transformation models; localised mutual information

Brain 3D PET MRI

Par0023

intrapatient; rigid + B-spline transformation; localized mutual information combined with bending energy penalty

Head & Neck CT MRI PET

Par0027

intra patient; rigid + B-spline transformation; mutual information, multi parametric mutual information

Head & Neck CT MRI PET

Name	Image Properties	Description	Paper
Par0002	Brain 3D PET MRI	interpatient; several transformation models; localised mutual information	S. Klein, M. Staring, K. Murphy, M.A. Viergever, J.P.W. Pluim, "`elastix`: a toolbox for intensity based medical image registration," IEEE Transactions on Medical Imaging, vol. 29, no. 1, pp. 196-205, 2010.
Par0023	Head & Neck CT MRI PET	intrapatient; rigid + B-spline transformation; localized mutual information combined with bending energy penalty	S. Leibfarth , D. Mönnich, S. Welz, C. Siegel, N. Schwenzer, H. Schmidt, D. Zips, D. Thorwarth, A strategy for multimodal deformable image registration to integrate PET/MR into radiotherapy treatment planning, Acta Oncologica 52, 1353-1359 (2013)
Par0027	Head & Neck CT MRI PET	intra patient; rigid + B-spline transformation; mutual information, multi parametric mutual information	V. Fortunati, R.F. Verhaart, F. Angeloni, A. van der Lugt, W.J. Niessen, J.F. Veenland, M.M. Paulides and T. van Walsum, Feasibility of Multimodal Deformable Registration for Head and Neck Tumor Treatment Planning, Int. J. Radiation Oncology Biology and physics 90, 85-93 (2014)