Model Zoo

A Model Zoo for parameter files used for image registration with Elastix, SimpleElastix or ITKElastix in various domains. Parameter files can be uploaded via the GitHub repository.

Par0046

inter-subject, affine + B-spline transformation;

Pelvis

Par0059

Intrapatient, B-spline transformation, mutual information, rigidity penalty

Pelvis 3D CT MRI

Par0043

intra-subject; multi-resolution (4), rigid, Mutual Information metric (Mattes) with Adaptive Stochastic Gradient Descent optimizer

Prostate Pelvis 3D CT MRI

Par0061

Intrapatient, rigid transformation

Pelvis 3D MRI

Name	Image Properties	Description	Paper
Par0046	Pelvis	inter-subject, affine + B-spline transformation;	None
Par0059	Pelvis 3D CT MRI	Intrapatient, B-spline transformation, mutual information, rigidity penalty	Florkow et al. (2019), Deep learning-based MR-to-CT synthesis: the influence of varying gradient echo-based MR images as input channels, under submission
Par0043	Prostate Pelvis 3D CT MRI	intra-subject; multi-resolution (4), rigid, Mutual Information metric (Mattes) with Adaptive Stochastic Gradient Descent optimizer	Maspero M, et al. (2017), Quantification of confounding factors in MRI-based dose calculations as applied to prostate IMRT. Phys Med Biol. 62(3)
Par0061	Pelvis 3D MRI	Intrapatient, rigid transformation	Werensteijn-Honingh et al. (2020), Impact of a vacuum cushion on intrafraction motion during online adaptive MR-guided SBRT, submitted.