Model Zoo

A Model Zoo for parameter files used for image registration with Elastix, SimpleElastix or ITKElastix in various domains. Parameter files can be uploaded via the GitHub repository.

Par0065

interpatient; rigid, affine and bspline transform; advanced cross correlation

Liver 3D MRI

Par0057

intra-subject; Rigid transformation; B-spline transformation

Liver 4D MRI

Par0047

intra-subject; B-spline transformation; groupwise registration; PCA metric

Abdomen Liver 4D MRI

Name	Image Properties	Description	Paper
Par0065	Liver 3D MRI	interpatient; rigid, affine and bspline transform; advanced cross correlation	Noah Jaitner, Yasmine Safraou, Matthias Anders, Jakob Schattenfroh, Tom Meyer, Biru Huang, Jakob Jordan, Oliver Boehm, Alfonso Caiazzo, Tobias Schaeffter, Jing Guo, Ingolf Sack (2024), Non-invasive assessment of portal pressure by combined measurement of volumetric strain and stiffness of in vivo human liver (submitted)
Par0057	Liver 4D MRI	intra-subject; Rigid transformation; B-spline transformation	Jansen et al. (2019) Liver segmentation and metastases detection in MR images using convolutional neural networks (submitted)
Par0047	Abdomen Liver 4D MRI	intra-subject; B-spline transformation; groupwise registration; PCA metric	M. J. A. Jansen, H. J. Kuijf, W. B. Veldhuis, F. J. Wessels, M. van Leeuwen, and J. P. W. Pluim, " Evaluation of motion correction for clinical dynamic contrast enhanced MRI of the liver," Phys. Med. Biol., 62(19), pp. 7556–7568, 2017.